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020 _a9781071635155
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024 7 _a10.1007/978-1-0716-3515-5
_2doi
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245 1 0 _aViral Metagenomics
_h[electronic resource] :
_bMethods and Protocols /
_cedited by Vitantonio Pantaleo, Laura Miozzi.
250 _a2nd ed. 2024.
264 1 _aNew York, NY :
_bSpringer US :
_bImprint: Humana,
_c2024.
300 _aXII, 288 p. 38 illus., 30 illus. in color.
_bonline resource.
336 _atext
_btxt
_2rdacontent
337 _acomputer
_bc
_2rdamedia
338 _aonline resource
_bcr
_2rdacarrier
341 0 _bTable of contents navigation
_2onix
341 0 _bSingle logical reading order
_2onix
341 0 _bShort alternative textual descriptions
_2onix
341 0 _bUse of color is not sole means of conveying information
_2onix
341 0 _bUse of high contrast between text and background color
_2onix
341 0 _bNext / Previous structural navigation
_2onix
341 0 _bAll non-decorative content supports reading without sight
_2onix
347 _atext file
_bPDF
_2rda
490 1 _aMethods in Molecular Biology,
_x1940-6029 ;
_v2732
505 0 _aExploring the Archaeal Virosphere by Metagenomics -- From Whole-Genome Shotgun Sequencing to Viral Community Profiling: The ViromeScan Tool -- Freshwater Viral Metagenome Analyses Targeting dsDNA Viruses -- Discovery and Identification of Viruses Infecting Oomycetes -- Metagenomic Analyses of Viruses in the Orchid Mycorrhizal Interaction using Improved Assemble Tools -- Determination of the Mycovirome of a Necrotrophic Fungus -- From Metagenomics to Ecogenomics: NGS-Based Approaches for Discovery of New Circular DNA Single-Stranded Viral Species -- SARS-CoV-2 Detection and Genome Sequencing in Urban Wastewaters -- Enrichment, Sequencing, and Identification of DNA Bacteriophages from Fecal Samples -- Exploration and Retrieval of Virus-Related Molecular Data using ExTaxsI: The Monkeypox Use Case -- Optimized Recovery of Viral DNA and RNA from Blood Plasma for Viral Metagenomics -- Targeted Whole Genome Sequencing of the Capripoxvirus Genome from Clinical Tissue Samples and Lyophilized Vaccine Batches -- Viromes of Plants Determined by High-Throughput Sequencing of Virus Derived siRNAs -- Validation of High-Throughput Sequencing (HTS) for Routine Detection of Citrus Viruses and Viroids -- Identification of DNA Viruses in Ancient DNA from Herbarium Samples -- The Oxford Nanopore MinION as a Versatile Technology for the Diagnosis and Characterization of Emerging Plant Viruses -- Detection of Plant Viruses using Nanopore Sequencing Based Metagenomic Approach -- Application of Nanopore-Based Sequencing to Identify Virus Infections in Woody Plants -- Distribution of Small RNAs Along Transposable Elements in Vitis vinifera during Somatic Embryogenesis.
520 _aThis second edition volume expands on the previous edition with discussions about the latest viral metagenomics aspects covering a range of different specimens such as soil, freshwater, wastewater, fecal samples, blood plasma, clinical tissues, fungi, and herbarium samples. Chapters also look at different viral groups including archaeal viruses, eukaryotic viruses, phages, mycoviruses, and circular DNA viruses. Techniques required for studying the three viral metagenomic steps of samples processing, library construction, and analysis of data are also discussed. Written in the highly successful Methods in Molecular Biology series format, chapters include introductions to their respective topics, lists of the necessary materials and reagents, step-by-step, readily reproducible laboratory protocols, and tips on troubleshooting and avoiding known pitfalls. Authoritative and cutting-edge, Vital Metagenomics: Methods and Protocols, Second Edition is a valuable resourcefor researchers who are interested in learning more about this important and developing field.
532 8 _aAccessibility summary: This PDF does not fully comply with PDF/UA standards, but does feature limited screen reader support, described non-text content (images, graphs), bookmarks for easy navigation and searchable, selectable text. Users of assistive technologies may experience difficulty navigating or interpreting content in this document. We recognize the importance of accessibility, and we welcome queries about accessibility for any of our products. If you have a question or an access need, please get in touch with us at accessibilitysupport@springernature.com.
532 8 _aNo reading system accessibility options actively disabled
532 8 _aPublisher contact for further accessibility information: accessibilitysupport@springernature.com
650 0 _aVirology.
650 0 _aBiomaterials.
650 0 _aNucleic acids.
650 0 _aGenomics.
650 1 4 _aVirology.
650 2 4 _aNucleic Acid.
650 2 4 _aGenomics.
700 1 _aPantaleo, Vitantonio.
_eeditor.
_4edt
_4http://id.loc.gov/vocabulary/relators/edt
700 1 _aMiozzi, Laura.
_eeditor.
_0(orcid)0000-0003-0410-8230
_1https://orcid.org/0000-0003-0410-8230
_4edt
_4http://id.loc.gov/vocabulary/relators/edt
710 2 _aSpringerLink (Online service)
773 0 _tSpringer Nature eBook
776 0 8 _iPrinted edition:
_z9781071635148
776 0 8 _iPrinted edition:
_z9781071635162
776 0 8 _iPrinted edition:
_z9781071635179
830 0 _aMethods in Molecular Biology,
_x1940-6029 ;
_v2732
856 4 0 _uhttps://doi.org/10.1007/978-1-0716-3515-5
912 _aZDB-2-PRO
999 _c8029
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